Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Gm10566-201ENSMUST00000086739 996 ntBASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc9Q8VC31 Gm10013-201ENSMUST00000106074 672 ntBASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Gm21559-201ENSMUST00000220638 855 ntBASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Gm8587-201ENSMUST00000076538 843 ntBASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc9Q8VC31 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gm11336-201ENSMUST00000118168 334 ntBASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gm43463-201ENSMUST00000195967 1803 ntBASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc9Q8VC31 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm10231-201ENSMUST00000181584 441 ntBASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm29707-201ENSMUST00000196325 491 ntBASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gm10175-202ENSMUST00000208752 441 ntBASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc9Q8VC31 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms