Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmc1Q8R4P5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmc1Q8R4P5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmc1Q8R4P5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Mir8117-201ENSMUST00000184773 107 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmc1Q8R4P5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Gm8584-201ENSMUST00000171982 758 ntBASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmc1Q8R4P5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms