Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.35□□□□□ -0.27
Rfc3Q8R323 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm7063-201ENSMUST00000186840 981 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm38294-201ENSMUST00000192831 381 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.34□□□□□ -0.27
Rfc3Q8R323 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc3Q8R323 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Rfc3Q8R323 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Gm27622-201ENSMUST00000183779 60 ntBASIC13.33□□□□□ -0.28
Rfc3Q8R323 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.33□□□□□ -0.28
Rfc3Q8R323 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.33□□□□□ -0.28
Rfc3Q8R323 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfc3Q8R323 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.32□□□□□ -0.28
Rfc3Q8R323 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfc3Q8R323 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms