Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Gm46209-201ENSMUST00000217912 553 ntBASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Gm7775-201ENSMUST00000218871 853 ntBASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm15653-201ENSMUST00000119247 907 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm27989-201ENSMUST00000184721 107 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm27321-201ENSMUST00000185021 205 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rpp40Q8R1F9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpp40Q8R1F9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Gm12134-201ENSMUST00000122109 520 ntBASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Gm43703-201ENSMUST00000200523 763 ntBASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms