Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.06□□□□□ -0.96
Cystm1Q8K353 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gm12497-201ENSMUST00000138778 237 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gm9172-201ENSMUST00000212092 954 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cystm1Q8K353 Gm38042-201ENSMUST00000191614 5208 ntBASIC9.05□□□□□ -0.96
Cystm1Q8K353 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms