Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Gm10275-202ENSMUST00000168697 495 ntBASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Gm10275-201ENSMUST00000092620 635 ntBASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.02■□□□□ 0.32
Cchcr1Q8K2I2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cchcr1Q8K2I2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm15427-201ENSMUST00000117288 531 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm27920-201ENSMUST00000183953 96 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm44492-201ENSMUST00000197012 141 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gm5364-201ENSMUST00000216789 889 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cchcr1Q8K2I2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cchcr1Q8K2I2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Gm11543-201ENSMUST00000120758 370 ntBASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cchcr1Q8K2I2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms