Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab11fip3Q8CHD8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab11fip3Q8CHD8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gm21470-201ENSMUST00000187680 696 ntBASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip3Q8CHD8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm10766-202ENSMUST00000194123 606 ntBASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm42612-201ENSMUST00000197986 623 ntBASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm43170-201ENSMUST00000199827 612 ntBASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Gm9797-201ENSMUST00000052902 613 ntBASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip3Q8CHD8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms