Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.84□□□□□ -0.35
ShfQ8CG80 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
ShfQ8CG80 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.83□□□□□ -0.36
ShfQ8CG80 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.83□□□□□ -0.36
ShfQ8CG80 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
ShfQ8CG80 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShfQ8CG80 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ShfQ8CG80 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.82□□□□□ -0.36
ShfQ8CG80 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.82□□□□□ -0.36
ShfQ8CG80 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
ShfQ8CG80 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.82□□□□□ -0.36
ShfQ8CG80 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.82□□□□□ -0.36
ShfQ8CG80 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ShfQ8CG80 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
ShfQ8CG80 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShfQ8CG80 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.81□□□□□ -0.36
ShfQ8CG80 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms