Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Gm4535-201ENSMUST00000182274 558 ntBASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Gm37153-201ENSMUST00000193637 231 ntBASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Gm10355-201ENSMUST00000097146 517 ntBASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Gm9726-201ENSMUST00000180321 678 ntBASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28bQ8CEG5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.22□□□□□ -0.13
Ccdc28bQ8CEG5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms