Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Gm37935-201ENSMUST00000192012 982 ntBASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrif1Q8CDD9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Grk6-205ENSMUST00000224653 2976 ntBASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms