Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps53Q8CCB4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Gm5745-201ENSMUST00000183748 313 ntBASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps53Q8CCB4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Gm5779-201ENSMUST00000218467 910 ntBASIC16.74■□□□□ 0.27
Vps53Q8CCB4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps53Q8CCB4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm23547-201ENSMUST00000158210 271 ntBASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps53Q8CCB4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms