Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm11524-201ENSMUST00000119349 807 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a6Q8C6K9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a6Q8C6K9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Gm15393-201ENSMUST00000120499 219 ntBASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms