Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gm13616-201ENSMUST00000120600 222 ntBASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc60Q8C4J0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Gm15693-201ENSMUST00000120470 637 ntBASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Gm6222-201ENSMUST00000120787 396 ntBASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc60Q8C4J0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc60Q8C4J0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms