Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.85□□□□□ -0.03
Trub1Q8C0D0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trub1Q8C0D0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Trub1Q8C0D0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trub1Q8C0D0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trub1Q8C0D0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trub1Q8C0D0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.83□□□□□ -0.04
Trub1Q8C0D0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms