Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm23616-201ENSMUST00000177797 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm25871-201ENSMUST00000177816 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm24752-201ENSMUST00000178240 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm24496-201ENSMUST00000178287 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm25649-201ENSMUST00000178476 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm25548-201ENSMUST00000178681 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm23147-201ENSMUST00000178841 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm26095-201ENSMUST00000179270 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm22171-201ENSMUST00000179283 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm23936-201ENSMUST00000179354 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm22619-201ENSMUST00000179516 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm25255-201ENSMUST00000179579 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm24755-201ENSMUST00000179691 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm26506-201ENSMUST00000179692 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm25086-201ENSMUST00000179931 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm23243-201ENSMUST00000180047 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm24659-201ENSMUST00000180212 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm24169-201ENSMUST00000180244 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm23689-201ENSMUST00000180354 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm27359-201ENSMUST00000184153 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm27785-201ENSMUST00000184268 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm27466-201ENSMUST00000184396 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm27703-201ENSMUST00000184836 110 ntBASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sfr1Q8BP27 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Gm24158-201ENSMUST00000175263 71 ntBASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sfr1Q8BP27 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Gm9824-201ENSMUST00000178707 561 ntBASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sfr1Q8BP27 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms