Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Gm18246-201ENSMUST00000221023 728 ntBASIC15.3■□□□□ 0.04
Trim6Q8BGE7 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim6Q8BGE7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Ank2-226ENSMUST00000189368 339 ntBASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim6Q8BGE7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms