Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Usp6nlQ80XC3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Gm15678-201ENSMUST00000117573 960 ntBASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Gm6266-201ENSMUST00000203844 806 ntBASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Usp6nlQ80XC3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Gm12341-201ENSMUST00000119724 503 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Gm9002-201ENSMUST00000178437 499 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Gm27701-201ENSMUST00000184498 110 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp6nlQ80XC3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Gm12882-201ENSMUST00000121696 517 ntBASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Gm5035-201ENSMUST00000215581 927 ntBASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms