Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3tc2Q80VA5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Gm15653-201ENSMUST00000119247 907 ntBASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Gm44719-201ENSMUST00000206404 149 ntBASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Gm16476-201ENSMUST00000221544 139 ntBASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh3tc2Q80VA5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm3436-201ENSMUST00000179930 840 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm37917-201ENSMUST00000194711 392 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm45668-201ENSMUST00000211271 493 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Celf4-206ENSMUST00000224553 1729 ntBASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3tc2Q80VA5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3tc2Q80VA5 Gm6222-201ENSMUST00000120787 396 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms