Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Gm23547-201ENSMUST00000158210 271 ntBASIC14.46□□□□□ -0.09
Usp8Q80U87 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.46□□□□□ -0.09
Usp8Q80U87 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Usp8Q80U87 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.46□□□□□ -0.09
Usp8Q80U87 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp8Q80U87 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Usp8Q80U87 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp8Q80U87 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.45□□□□□ -0.1
Usp8Q80U87 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp8Q80U87 Matn2-206ENSMUST00000228570 2798 ntBASIC14.45□□□□□ -0.1
Usp8Q80U87 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp8Q80U87 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.44□□□□□ -0.1
Usp8Q80U87 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.44□□□□□ -0.1
Usp8Q80U87 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.44□□□□□ -0.1
Usp8Q80U87 Gm2272-201ENSMUST00000194903 582 ntBASIC14.44□□□□□ -0.1
Usp8Q80U87 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp8Q80U87 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp8Q80U87 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms