Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc2Q6PDG5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc2Q6PDG5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm2810-201ENSMUST00000118681 990 ntBASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm10275-202ENSMUST00000168697 495 ntBASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Gm10275-201ENSMUST00000092620 635 ntBASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcc2Q6PDG5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcc2Q6PDG5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms