Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.36□□□□□ -0.27
AtmQ62388 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AtmQ62388 Gm8213-201ENSMUST00000118191 441 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Gm5523-201ENSMUST00000180415 997 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.36□□□□□ -0.27
AtmQ62388 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AtmQ62388 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.35□□□□□ -0.27
AtmQ62388 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
AtmQ62388 Gm13612-201ENSMUST00000119276 390 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.35□□□□□ -0.27
AtmQ62388 Gm4804-201ENSMUST00000182234 999 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Mir6979-201ENSMUST00000183927 56 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Gm37008-201ENSMUST00000195712 319 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
AtmQ62388 Gm11803-201ENSMUST00000119966 444 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
AtmQ62388 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Gm16505-201ENSMUST00000179981 232 ntBASIC13.35□□□□□ -0.27
AtmQ62388 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Gm29705-201ENSMUST00000212598 474 ntBASIC13.35□□□□□ -0.27
AtmQ62388 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.35□□□□□ -0.27
AtmQ62388 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
AtmQ62388 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AtmQ62388 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.34□□□□□ -0.27
AtmQ62388 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AtmQ62388 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AtmQ62388 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Gm29396-201ENSMUST00000185659 716 ntBASIC13.34□□□□□ -0.27
AtmQ62388 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.34□□□□□ -0.27
AtmQ62388 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.34□□□□□ -0.27
AtmQ62388 Cts7-204ENSMUST00000225321 1257 ntBASIC13.34□□□□□ -0.27
AtmQ62388 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AtmQ62388 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AtmQ62388 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Gm12134-201ENSMUST00000122109 520 ntBASIC13.34□□□□□ -0.27
AtmQ62388 Gm13786-201ENSMUST00000122371 333 ntBASIC13.34□□□□□ -0.27
AtmQ62388 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.34□□□□□ -0.27
AtmQ62388 Gm6082-201ENSMUST00000215204 454 ntBASIC13.34□□□□□ -0.27
AtmQ62388 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.34□□□□□ -0.27
AtmQ62388 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AtmQ62388 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.33□□□□□ -0.27
AtmQ62388 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AtmQ62388 Gm14381-201ENSMUST00000122105 414 ntBASIC13.33□□□□□ -0.27
AtmQ62388 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.33□□□□□ -0.27
AtmQ62388 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.33□□□□□ -0.27
AtmQ62388 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AtmQ62388 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AtmQ62388 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AtmQ62388 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AtmQ62388 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.33□□□□□ -0.28
AtmQ62388 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AtmQ62388 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AtmQ62388 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AtmQ62388 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.33□□□□□ -0.28
AtmQ62388 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms