Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Gm27321-201ENSMUST00000185021 205 ntBASIC16.97■□□□□ 0.31
Ctr9Q62018 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.96■□□□□ 0.31
Ctr9Q62018 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.96■□□□□ 0.31
Ctr9Q62018 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ctr9Q62018 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ctr9Q62018 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Ctr9Q62018 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctr9Q62018 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ctr9Q62018 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctr9Q62018 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Mir8102-201ENSMUST00000184148 139 ntBASIC16.94■□□□□ 0.3
Ctr9Q62018 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.94■□□□□ 0.3
Ctr9Q62018 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctr9Q62018 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ctr9Q62018 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms