Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.83□□□□□ -0.2
ClpbQ60649 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ClpbQ60649 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ClpbQ60649 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.82□□□□□ -0.2
ClpbQ60649 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.82□□□□□ -0.2
ClpbQ60649 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.82□□□□□ -0.2
ClpbQ60649 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.82□□□□□ -0.2
ClpbQ60649 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
ClpbQ60649 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClpbQ60649 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ClpbQ60649 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.81□□□□□ -0.2
ClpbQ60649 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.81□□□□□ -0.2
ClpbQ60649 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.81□□□□□ -0.2
ClpbQ60649 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClpbQ60649 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.8□□□□□ -0.2
ClpbQ60649 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.8□□□□□ -0.2
ClpbQ60649 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ClpbQ60649 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClpbQ60649 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms