Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.73□□□□□ -0.21
Nr1h4Q60641 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.73□□□□□ -0.21
Nr1h4Q60641 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nr1h4Q60641 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.72□□□□□ -0.21
Nr1h4Q60641 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.72□□□□□ -0.21
Nr1h4Q60641 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gm27459-201ENSMUST00000184860 107 ntBASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nr1h4Q60641 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.71□□□□□ -0.21
Nr1h4Q60641 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Ank2-226ENSMUST00000189368 339 ntBASIC13.71□□□□□ -0.21
Nr1h4Q60641 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nr1h4Q60641 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nr1h4Q60641 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms