Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom1Q5SX79 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gm24694-201ENSMUST00000180054 110 ntBASIC15.32■□□□□ 0.04
Shroom1Q5SX79 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gm27663-201ENSMUST00000184839 110 ntBASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom1Q5SX79 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Gm16476-201ENSMUST00000221544 139 ntBASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.31■□□□□ 0.04
Shroom1Q5SX79 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm6222-201ENSMUST00000120787 396 ntBASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm16215-201ENSMUST00000161990 637 ntBASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Gm9182-201ENSMUST00000217829 639 ntBASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms