Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Gm43474-201ENSMUST00000196415 774 ntBASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna2d4Q5RJF7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Gm37230-201ENSMUST00000194491 818 ntBASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna2d4Q5RJF7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna2d4Q5RJF7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Gm14701-201ENSMUST00000117156 348 ntBASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna2d4Q5RJF7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna2d4Q5RJF7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms