Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rc3h1Q4VGL6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Gm20445-201ENSMUST00000061905 565 ntBASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rc3h1Q4VGL6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rc3h1Q4VGL6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Gm33320-201ENSMUST00000192232 530 ntBASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rc3h1Q4VGL6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Gm22189-201ENSMUST00000103822 86 ntBASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Gm42612-201ENSMUST00000197986 623 ntBASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Gm43170-201ENSMUST00000199827 612 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms