Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap2Q3V1H1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap2Q3V1H1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Gm25144-201ENSMUST00000179561 110 ntBASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Gm25352-201ENSMUST00000179815 110 ntBASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Mir125a-201ENSMUST00000083545 68 ntBASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap2Q3V1H1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Gm24543-201ENSMUST00000103867 82 ntBASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Gm13616-201ENSMUST00000120600 222 ntBASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Gm27622-201ENSMUST00000183779 60 ntBASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Gm27533-201ENSMUST00000183800 152 ntBASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ckap2Q3V1H1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms