Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc27Q3V036 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc27Q3V036 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.38■□□□□ 0.53
Ccdc27Q3V036 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Rubie-203ENSMUST00000227803 2430 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Mir5126-201ENSMUST00000175513 77 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Gm27628-201ENSMUST00000184911 107 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc27Q3V036 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Acot6-202ENSMUST00000222921 3622 ntBASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc27Q3V036 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc27Q3V036 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc27Q3V036 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms