Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Gm45167-201ENSMUST00000208007 322 ntBASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Gm6550-201ENSMUST00000187574 993 ntBASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43aQ3TL54 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trim43aQ3TL54 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.27■□□□□ 0.03
Trim43aQ3TL54 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43aQ3TL54 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.27■□□□□ 0.03
Trim43aQ3TL54 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43aQ3TL54 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43aQ3TL54 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43aQ3TL54 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm4899-201ENSMUST00000178708 719 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms