Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm5566-201ENSMUST00000116118 459 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Gm10275-202ENSMUST00000168697 495 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 Gm27622-201ENSMUST00000183779 60 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Gm10275-201ENSMUST00000092620 635 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox4Q06831 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox4Q06831 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Sox4Q06831 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sox4Q06831 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.15□□□□□ -0.14
Sox4Q06831 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox4Q06831 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sox4Q06831 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.15□□□□□ -0.14
Sox4Q06831 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox4Q06831 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox4Q06831 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox4Q06831 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox4Q06831 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox4Q06831 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox4Q06831 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox4Q06831 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Gm27631-201ENSMUST00000184163 466 ntBASIC14.14□□□□□ -0.15
Sox4Q06831 Gm17837-201ENSMUST00000186435 985 ntBASIC14.14□□□□□ -0.15
Sox4Q06831 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox4Q06831 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.14□□□□□ -0.15
Sox4Q06831 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox4Q06831 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox4Q06831 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sox4Q06831 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.14□□□□□ -0.15
Sox4Q06831 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox4Q06831 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox4Q06831 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox4Q06831 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox4Q06831 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.13□□□□□ -0.15
Sox4Q06831 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm24543-201ENSMUST00000103867 82 ntBASIC14.13□□□□□ -0.15
Sox4Q06831 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm13223-201ENSMUST00000118609 747 ntBASIC14.13□□□□□ -0.15
Sox4Q06831 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm23547-201ENSMUST00000158210 271 ntBASIC14.13□□□□□ -0.15
Sox4Q06831 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox4Q06831 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms