Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.35□□□□□ -0.43
Smn1P97801 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Gm7222-201ENSMUST00000117512 906 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Gm13464-201ENSMUST00000119418 935 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.35□□□□□ -0.43
Smn1P97801 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.35□□□□□ -0.43
Smn1P97801 Gm45167-201ENSMUST00000208007 322 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.35□□□□□ -0.43
Smn1P97801 Gm18669-201ENSMUST00000216049 778 ntBASIC12.35□□□□□ -0.43
Smn1P97801 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smn1P97801 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.35□□□□□ -0.43
Smn1P97801 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smn1P97801 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.34□□□□□ -0.43
Smn1P97801 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Smn1P97801 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Gm8749-201ENSMUST00000117737 331 ntBASIC12.34□□□□□ -0.43
Smn1P97801 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smn1P97801 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.34□□□□□ -0.43
Smn1P97801 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Smn1P97801 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.34□□□□□ -0.43
Smn1P97801 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.34□□□□□ -0.43
Smn1P97801 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smn1P97801 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smn1P97801 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Smn1P97801 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Smn1P97801 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Smn1P97801 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smn1P97801 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Smn1P97801 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.33□□□□□ -0.44
Smn1P97801 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms