Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43bP86448 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim43bP86448 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Gm27702-201ENSMUST00000184512 56 ntBASIC14.83□□□□□ -0.04
Trim43bP86448 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim43bP86448 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.83□□□□□ -0.04
Trim43bP86448 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.83□□□□□ -0.04
Trim43bP86448 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim43bP86448 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim43bP86448 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Trim43bP86448 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim43bP86448 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43bP86448 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43bP86448 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim43bP86448 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43bP86448 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trim43bP86448 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim43bP86448 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43bP86448 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim43bP86448 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Matn2-206ENSMUST00000228570 2798 ntBASIC14.82□□□□□ -0.04
Trim43bP86448 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43bP86448 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43bP86448 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Trim43bP86448 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim43bP86448 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim43bP86448 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim43bP86448 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim43bP86448 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43bP86448 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43bP86448 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim43bP86448 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43bP86448 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43bP86448 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.81□□□□□ -0.04
Trim43bP86448 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43bP86448 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43bP86448 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43bP86448 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim43bP86448 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.8□□□□□ -0.04
Trim43bP86448 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim43bP86448 Gm27301-201ENSMUST00000184012 127 ntBASIC14.8□□□□□ -0.04
Trim43bP86448 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.8□□□□□ -0.04
Trim43bP86448 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.8□□□□□ -0.04
Trim43bP86448 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms