Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Gm9726-201ENSMUST00000180321 678 ntBASIC12□□□□□ -0.49
Pdlim4P70271 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12□□□□□ -0.49
Pdlim4P70271 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12□□□□□ -0.49
Pdlim4P70271 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pdlim4P70271 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pdlim4P70271 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Gm13365-201ENSMUST00000121188 973 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 Gm26308-201ENSMUST00000157768 69 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Gm27920-201ENSMUST00000183953 96 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim4P70271 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdlim4P70271 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.99□□□□□ -0.49
Pdlim4P70271 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim4P70271 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pdlim4P70271 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.98□□□□□ -0.49
Pdlim4P70271 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.98□□□□□ -0.49
Pdlim4P70271 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pdlim4P70271 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.98□□□□□ -0.49
Pdlim4P70271 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim4P70271 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pdlim4P70271 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.98□□□□□ -0.49
Pdlim4P70271 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.98□□□□□ -0.49
Pdlim4P70271 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms