Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rps28P62858 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.41□□□□□ -1.06
Rps28P62858 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 AC160410.1-201ENSMUST00000219298 1972 ntBASIC8.41□□□□□ -1.06
Rps28P62858 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC8.41□□□□□ -1.06
Rps28P62858 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Rps28P62858 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Gm8617-201ENSMUST00000118796 2222 ntBASIC8.41□□□□□ -1.06
Rps28P62858 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC8.41□□□□□ -1.06
Rps28P62858 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rps28P62858 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rps28P62858 Gm37057-201ENSMUST00000192624 1916 ntBASIC8.41□□□□□ -1.06
Rps28P62858 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Gm8320-201ENSMUST00000177584 1762 ntBASIC8.4□□□□□ -1.06
Rps28P62858 Gm8303-201ENSMUST00000178371 1762 ntBASIC8.4□□□□□ -1.06
Rps28P62858 Gm8331-201ENSMUST00000178433 1762 ntBASIC8.4□□□□□ -1.06
Rps28P62858 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
Rps28P62858 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.4□□□□□ -1.06
Rps28P62858 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC8.4□□□□□ -1.06
Rps28P62858 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rps28P62858 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rps28P62858 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
Rps28P62858 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC8.4□□□□□ -1.06
Rps28P62858 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rps28P62858 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC8.4□□□□□ -1.06
Rps28P62858 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC8.4□□□□□ -1.06
Rps28P62858 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Rps28P62858 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rps28P62858 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rps28P62858 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.4□□□□□ -1.07
Rps28P62858 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.4□□□□□ -1.07
Rps28P62858 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rps28P62858 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms