Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.12□□□□□ -0.31
Lsm3P62311 Gm8344-201ENSMUST00000119813 856 ntBASIC13.12□□□□□ -0.31
Lsm3P62311 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Gm20760-201ENSMUST00000179197 648 ntBASIC13.12□□□□□ -0.31
Lsm3P62311 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.12□□□□□ -0.31
Lsm3P62311 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lsm3P62311 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lsm3P62311 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lsm3P62311 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lsm3P62311 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.12□□□□□ -0.31
Lsm3P62311 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Lsm3P62311 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Lsm3P62311 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm3P62311 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Lsm3P62311 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm3P62311 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm3P62311 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm3P62311 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm3P62311 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Lsm3P62311 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm18959-201ENSMUST00000208954 655 ntBASIC13.11□□□□□ -0.31
Lsm3P62311 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Lsm3P62311 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.11□□□□□ -0.31
Lsm3P62311 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Lsm3P62311 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm3P62311 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lsm3P62311 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Gm13559-201ENSMUST00000120476 863 ntBASIC13.1□□□□□ -0.31
Lsm3P62311 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Lsm3P62311 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.1□□□□□ -0.31
Lsm3P62311 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms