Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cks1bP61025 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm8825-201ENSMUST00000182565 998 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm4518-201ENSMUST00000182638 718 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.3□□□□□ -0.76
Cks1bP61025 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cks1bP61025 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.3□□□□□ -0.76
Cks1bP61025 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1bP61025 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Cks1bP61025 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Gm25406-201ENSMUST00000157599 105 ntBASIC10.29□□□□□ -0.76
Cks1bP61025 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.29□□□□□ -0.76
Cks1bP61025 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cks1bP61025 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cks1bP61025 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Cks1bP61025 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cks1bP61025 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1bP61025 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Cks1bP61025 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.28□□□□□ -0.76
Cks1bP61025 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms