Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.32■□□□□ 0.68
Nphp4P59240 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nphp4P59240 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nphp4P59240 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nphp4P59240 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.31■□□□□ 0.68
Nphp4P59240 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Nphp4P59240 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Gm8584-201ENSMUST00000171982 758 ntBASIC19.31■□□□□ 0.68
Nphp4P59240 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.31■□□□□ 0.68
Nphp4P59240 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC19.31■□□□□ 0.68
Nphp4P59240 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.31■□□□□ 0.68
Nphp4P59240 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nphp4P59240 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC19.3■□□□□ 0.68
Nphp4P59240 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nphp4P59240 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.3■□□□□ 0.68
Nphp4P59240 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nphp4P59240 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 AC161252.3-201ENSMUST00000225465 1549 ntBASIC19.3■□□□□ 0.68
Nphp4P59240 AC192088.1-201ENSMUST00000227561 301 ntBASIC19.3■□□□□ 0.68
Nphp4P59240 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.3■□□□□ 0.68
Nphp4P59240 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.3■□□□□ 0.68
Nphp4P59240 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Nphp4P59240 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.3■□□□□ 0.68
Nphp4P59240 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nphp4P59240 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nphp4P59240 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.29■□□□□ 0.68
Nphp4P59240 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Gm17150-201ENSMUST00000165577 381 ntBASIC19.29■□□□□ 0.68
Nphp4P59240 Gm3809-201ENSMUST00000180973 1006 ntBASIC19.29■□□□□ 0.68
Nphp4P59240 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nphp4P59240 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nphp4P59240 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Nphp4P59240 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nphp4P59240 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.29■□□□□ 0.68
Nphp4P59240 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nphp4P59240 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.29■□□□□ 0.68
Nphp4P59240 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC19.28■□□□□ 0.68
Nphp4P59240 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Nphp4P59240 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC19.28■□□□□ 0.68
Nphp4P59240 AC166997.1-201ENSMUST00000225122 572 ntBASIC19.28■□□□□ 0.68
Nphp4P59240 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC19.28■□□□□ 0.68
Nphp4P59240 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms