Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Irf5P56477 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.09■□□□□ 0.33
Irf5P56477 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Gm13015-201ENSMUST00000118674 204 ntBASIC17.09■□□□□ 0.33
Irf5P56477 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Irf5P56477 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Irf5P56477 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Irf5P56477 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.09■□□□□ 0.33
Irf5P56477 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf5P56477 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Irf5P56477 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.08■□□□□ 0.33
Irf5P56477 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Irf5P56477 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Irf5P56477 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.08■□□□□ 0.32
Irf5P56477 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Irf5P56477 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Irf5P56477 Gm16215-201ENSMUST00000161990 637 ntBASIC17.08■□□□□ 0.32
Irf5P56477 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Gm9794-201ENSMUST00000202370 423 ntBASIC17.08■□□□□ 0.32
Irf5P56477 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.08■□□□□ 0.32
Irf5P56477 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf5P56477 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Syt7-205ENSMUST00000224135 1557 ntBASIC17.07■□□□□ 0.32
Irf5P56477 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
Irf5P56477 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Syt7-204ENSMUST00000223586 1344 ntBASIC17.07■□□□□ 0.32
Irf5P56477 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Irf5P56477 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.07■□□□□ 0.32
Irf5P56477 Gm15487-201ENSMUST00000122373 465 ntBASIC17.07■□□□□ 0.32
Irf5P56477 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.07■□□□□ 0.32
Irf5P56477 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Irf5P56477 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.07■□□□□ 0.32
Irf5P56477 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Irf5P56477 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Irf5P56477 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.07■□□□□ 0.32
Irf5P56477 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf5P56477 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
Irf5P56477 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.06■□□□□ 0.32
Irf5P56477 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Gm44855-201ENSMUST00000205725 362 ntBASIC17.06■□□□□ 0.32
Irf5P56477 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.06■□□□□ 0.32
Irf5P56477 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf5P56477 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms