Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sox1P53783 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sox1P53783 Gm13689-201ENSMUST00000119360 685 ntBASIC14.62□□□□□ -0.07
Sox1P53783 Gm11803-201ENSMUST00000119966 444 ntBASIC14.62□□□□□ -0.07
Sox1P53783 Gm11793-201ENSMUST00000120433 981 ntBASIC14.62□□□□□ -0.07
Sox1P53783 B9d1os-201ENSMUST00000137010 674 ntBASIC14.62□□□□□ -0.07
Sox1P53783 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox1P53783 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Gm37230-201ENSMUST00000194491 818 ntBASIC14.62□□□□□ -0.07
Sox1P53783 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sox1P53783 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Sox1P53783 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox1P53783 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox1P53783 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox1P53783 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Gm21470-201ENSMUST00000187680 696 ntBASIC14.61□□□□□ -0.07
Sox1P53783 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sox1P53783 Olfr284-202ENSMUST00000206647 966 ntBASIC14.61□□□□□ -0.07
Sox1P53783 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sox1P53783 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Sox1P53783 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox1P53783 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox1P53783 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox1P53783 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sox1P53783 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Gm43094-201ENSMUST00000196549 921 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Gm42627-201ENSMUST00000197347 224 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Gm19078-201ENSMUST00000206311 727 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Gm6082-201ENSMUST00000215204 454 ntBASIC14.6□□□□□ -0.07
Sox1P53783 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.6□□□□□ -0.07
Sox1P53783 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox1P53783 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox1P53783 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.59□□□□□ -0.07
Sox1P53783 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.59□□□□□ -0.07
Sox1P53783 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Gm4804-201ENSMUST00000182234 999 ntBASIC14.59□□□□□ -0.07
Sox1P53783 Gm27320-201ENSMUST00000184892 109 ntBASIC14.59□□□□□ -0.07
Sox1P53783 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox1P53783 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox1P53783 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms