Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm27438-201ENSMUST00000183480 110 ntBASIC13.88□□□□□ -0.19
Lbx1P52955 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Gm38158-201ENSMUST00000194617 339 ntBASIC13.88□□□□□ -0.19
Lbx1P52955 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.88□□□□□ -0.19
Lbx1P52955 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.88□□□□□ -0.19
Lbx1P52955 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lbx1P52955 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.88□□□□□ -0.19
Lbx1P52955 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.88□□□□□ -0.19
Lbx1P52955 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lbx1P52955 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lbx1P52955 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.87□□□□□ -0.19
Lbx1P52955 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.87□□□□□ -0.19
Lbx1P52955 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.87□□□□□ -0.19
Lbx1P52955 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.87□□□□□ -0.19
Lbx1P52955 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lbx1P52955 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.87□□□□□ -0.19
Lbx1P52955 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Lbx1P52955 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.86□□□□□ -0.19
Lbx1P52955 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.86□□□□□ -0.19
Lbx1P52955 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lbx1P52955 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Gm12566-201ENSMUST00000121479 359 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.86□□□□□ -0.19
Lbx1P52955 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Gm24990-201ENSMUST00000157406 323 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Gm6407-201ENSMUST00000176468 549 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Gm4804-201ENSMUST00000182234 999 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Gm3222-201ENSMUST00000071282 990 ntBASIC13.86□□□□□ -0.19
Lbx1P52955 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lbx1P52955 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Lbx1P52955 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms