Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccr4P51680 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.35□□□□□ -0.27
Ccr4P51680 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.35□□□□□ -0.27
Ccr4P51680 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ccr4P51680 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccr4P51680 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr4P51680 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccr4P51680 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.34□□□□□ -0.27
Ccr4P51680 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Mir3113-201ENSMUST00000175478 76 ntBASIC13.34□□□□□ -0.27
Ccr4P51680 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.34□□□□□ -0.27
Ccr4P51680 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccr4P51680 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ccr4P51680 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr4P51680 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccr4P51680 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccr4P51680 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccr4P51680 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccr4P51680 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.33□□□□□ -0.28
Ccr4P51680 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.33□□□□□ -0.28
Ccr4P51680 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccr4P51680 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr4P51680 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccr4P51680 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccr4P51680 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccr4P51680 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccr4P51680 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccr4P51680 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccr4P51680 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr4P51680 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms