Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox18P43680 Gm13226-201ENSMUST00000117838 404 ntBASIC13.81□□□□□ -0.2
Sox18P43680 Gm14913-201ENSMUST00000120011 1093 ntBASIC13.81□□□□□ -0.2
Sox18P43680 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Snora78-201ENSMUST00000158630 128 ntBASIC13.81□□□□□ -0.2
Sox18P43680 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox18P43680 Gm45453-201ENSMUST00000211758 853 ntBASIC13.81□□□□□ -0.2
Sox18P43680 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox18P43680 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.81□□□□□ -0.2
Sox18P43680 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sox18P43680 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sox18P43680 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox18P43680 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox18P43680 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox18P43680 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox18P43680 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.8□□□□□ -0.2
Sox18P43680 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox18P43680 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox18P43680 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Gm5354-201ENSMUST00000182417 973 ntBASIC13.8□□□□□ -0.2
Sox18P43680 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC13.8□□□□□ -0.2
Sox18P43680 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.8□□□□□ -0.2
Sox18P43680 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Sox18P43680 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox18P43680 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox18P43680 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox18P43680 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox18P43680 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.8□□□□□ -0.2
Sox18P43680 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox18P43680 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox18P43680 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox18P43680 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox18P43680 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sox18P43680 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Gm12439-201ENSMUST00000117162 365 ntBASIC13.79□□□□□ -0.2
Sox18P43680 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Gm27839-201ENSMUST00000184242 106 ntBASIC13.79□□□□□ -0.2
Sox18P43680 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox18P43680 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox18P43680 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox18P43680 Olfr582-201ENSMUST00000098212 960 ntBASIC13.79□□□□□ -0.2
Sox18P43680 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox18P43680 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sox18P43680 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Sox18P43680 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox18P43680 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms