Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1dP43277 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hist1h1dP43277 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.21□□□□□ -0.45
Hist1h1dP43277 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.21□□□□□ -0.46
Hist1h1dP43277 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.21□□□□□ -0.46
Hist1h1dP43277 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.2□□□□□ -0.46
Hist1h1dP43277 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.2□□□□□ -0.46
Hist1h1dP43277 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.2□□□□□ -0.46
Hist1h1dP43277 AV026068-213ENSMUST00000223675 1171 ntBASIC12.2□□□□□ -0.46
Hist1h1dP43277 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.2□□□□□ -0.46
Hist1h1dP43277 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1dP43277 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.19□□□□□ -0.46
Hist1h1dP43277 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Hist1h1dP43277 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.18□□□□□ -0.46
Hist1h1dP43277 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hist1h1dP43277 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hist1h1dP43277 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1dP43277 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Hist1h1dP43277 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.18□□□□□ -0.46
Hist1h1dP43277 Gm2272-201ENSMUST00000194903 582 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms