Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdx2P43241 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdx2P43241 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.62□□□□□ -0.23
Cdx2P43241 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdx2P43241 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Cdx2P43241 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdx2P43241 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdx2P43241 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx2P43241 Gm27839-201ENSMUST00000184242 106 ntBASIC13.61□□□□□ -0.23
Cdx2P43241 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdx2P43241 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdx2P43241 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdx2P43241 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdx2P43241 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Cdx2P43241 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx2P43241 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cdx2P43241 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdx2P43241 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdx2P43241 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdx2P43241 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.6□□□□□ -0.23
Cdx2P43241 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdx2P43241 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cdx2P43241 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 BC037039-201ENSMUST00000192003 2205 ntBASIC13.6□□□□□ -0.23
Cdx2P43241 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.6□□□□□ -0.23
Cdx2P43241 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx2P43241 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdx2P43241 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdx2P43241 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdx2P43241 Gm12742-201ENSMUST00000117326 410 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Gm12390-201ENSMUST00000117897 397 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Mir1894-201ENSMUST00000122802 81 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Gm5425-201ENSMUST00000214125 459 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms