Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmx3P42581 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmx3P42581 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmx3P42581 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmx3P42581 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmx3P42581 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmx3P42581 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.07□□□□□ -0.48
Hmx3P42581 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.07□□□□□ -0.48
Hmx3P42581 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmx3P42581 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Hmx3P42581 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.07□□□□□ -0.48
Hmx3P42581 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmx3P42581 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Hmx3P42581 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmx3P42581 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Hmx3P42581 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hmx3P42581 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.06□□□□□ -0.48
Hmx3P42581 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.06□□□□□ -0.48
Hmx3P42581 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Pck2-205ENSMUST00000226352 2784 ntBASIC12.06□□□□□ -0.48
Hmx3P42581 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hmx3P42581 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmx3P42581 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.05□□□□□ -0.48
Hmx3P42581 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Hmx3P42581 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmx3P42581 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hmx3P42581 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmx3P42581 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmx3P42581 Gm28033-201ENSMUST00000184224 96 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms