Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Upk2P38575 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Upk2P38575 Mir1895-201ENSMUST00000122615 79 ntBASIC12.63□□□□□ -0.39
Upk2P38575 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.63□□□□□ -0.39
Upk2P38575 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Upk2P38575 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Upk2P38575 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk2P38575 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Upk2P38575 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk2P38575 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.62□□□□□ -0.39
Upk2P38575 Gm4995-201ENSMUST00000117247 432 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.62□□□□□ -0.39
Upk2P38575 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Upk2P38575 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Upk2P38575 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk2P38575 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.62□□□□□ -0.39
Upk2P38575 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk2P38575 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.61□□□□□ -0.39
Upk2P38575 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Upk2P38575 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk2P38575 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk2P38575 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.61□□□□□ -0.39
Upk2P38575 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk2P38575 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.61□□□□□ -0.39
Upk2P38575 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.61□□□□□ -0.39
Upk2P38575 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.61□□□□□ -0.39
Upk2P38575 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.61□□□□□ -0.39
Upk2P38575 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Upk2P38575 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.61□□□□□ -0.39
Upk2P38575 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk2P38575 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk2P38575 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk2P38575 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms