Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
HmgclP38060 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HmgclP38060 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HmgclP38060 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HmgclP38060 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HmgclP38060 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HmgclP38060 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HmgclP38060 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HmgclP38060 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Gm23935-201ENSMUST00000102303 57 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Gm24270-201ENSMUST00000102326 57 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Gm12882-201ENSMUST00000121696 517 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Gm24245-201ENSMUST00000157318 57 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.19□□□□□ -0.14
HmgclP38060 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.19□□□□□ -0.14
HmgclP38060 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HmgclP38060 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.18□□□□□ -0.14
HmgclP38060 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HmgclP38060 Gm43575-201ENSMUST00000196420 516 ntBASIC14.18□□□□□ -0.14
HmgclP38060 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.18□□□□□ -0.14
HmgclP38060 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HmgclP38060 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HmgclP38060 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms