Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.32□□□□□ -0.28
Thbs1P35441 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Thbs1P35441 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs1P35441 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.31□□□□□ -0.28
Thbs1P35441 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Gm11025-201ENSMUST00000140773 466 ntBASIC13.31□□□□□ -0.28
Thbs1P35441 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Gm20553-201ENSMUST00000204205 844 ntBASIC13.31□□□□□ -0.28
Thbs1P35441 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Thbs1P35441 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Thbs1P35441 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thbs1P35441 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs1P35441 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.3□□□□□ -0.28
Thbs1P35441 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.3□□□□□ -0.28
Thbs1P35441 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Thbs1P35441 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Thbs1P35441 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.3□□□□□ -0.28
Thbs1P35441 Gm45612-201ENSMUST00000211320 160 ntBASIC13.3□□□□□ -0.28
Thbs1P35441 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Thbs1P35441 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Thbs1P35441 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.3□□□□□ -0.28
Thbs1P35441 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs1P35441 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.29□□□□□ -0.28
Thbs1P35441 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Gm21156-201ENSMUST00000189693 869 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Thbs1P35441 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.29□□□□□ -0.28
Thbs1P35441 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.29□□□□□ -0.28
Thbs1P35441 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms