Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp6P0C0A3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp6P0C0A3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Gm14701-201ENSMUST00000117156 348 ntBASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Gm27920-201ENSMUST00000183953 96 ntBASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.68■□□□□ 0.1
Chmp6P0C0A3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp6P0C0A3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms